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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842213.1_cds_XP_016508288.1_21325
CDS Infomation

[gene=LOC107825883] [db_xref=GeneID:107825883] [protein=E3 ubiquitin-protein ligase SGR9, amyloplastic-like isoform X2] [protein_id=XP_016508288.1] [location=complement(join(73410..73423,73525..73670,74029..74585))] [gbkey=CDS]
Sequence

ATGGAAGATCAAAAACACTTAGAAGCCATAATCATGACAGCTCTTTCTACGTTAACACCT
TTGCAACTCACAAATCTAACTCACTATTCCTCCTCCCTCTACCACCATTACCACCGCCGT
ATTTTCTCTCTCCTCTCTTCTCCCACCCTTTTCTCTCTCACTCTCCACTACCTCAACTCC
CTCTCTCTCCACCAAAAATTCGTCCTCATCGCCCGTCACCTCTTGTCAAAACTCGCAATT
TTGGTATACTTCATGCAGAAAAAGACAATTTTGCCCCCACCCTCGACCACCTCCATGAAT
CTCCGTGACTTAGACGCAGTTCTTCTACTCCTACTCCTCTGCGAACTGCGCCAACACGAA
CCTGGGGCACTTGACGCCCCACCATCGCGTTGGCGCGATATCCTAGGTGACTATATAGCC
AAGGACATGTTGAAACTATCTAGCATTGAAAGTTCTAAAAGTGAAGTCATAATCAAGTTC
GTTGAGCTAGTCACAAAGTGCAAGAATTTTGTCAATGTCATGGCCTATGATGTTGGTGAA
CTCGGGCGGAGCTCCAGAATTCTTGACTCCGCTACTGGTGGTGAAGGAAAAGATAGCAAG
AACTTAGCCGCGTCTGTGGCGGTGGTGGCGGCGCTGCCATCAGTGGAAGTGATGAGTGGC
AGTGAAAGGGAATGTGTGATATGCAAAGAAGAGATGAGAGAAGCTGCCGTCCGATGA

Peptide Sequence

PEP ID

XP_016508288.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SGR9, amyloplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MEDQKHLEAIIMTALSTLTPLQLTNLTHYSSSLYHHYHRRIFSLLSSPTLFSLTLHYLNS
LSLHQKFVLIARHLLSKLAILVYFMQKKTILPPPSTTSMNLRDLDAVLLLLLLCELRQHE
PGALDAPPSRWRDILGDYIAKDMLKLSSIESSKSEVIIKFVELVTKCKNFVNVMAYDVGE
LGRSSRILDSATGGEGKDSKNLAASVAVVAALPSVEVMSGSERECVICKEEMREAAVR

Transcript Sequence

Gene sequence data has not been registered.